Blast

Program blastn blastp blastx tblastn tblastx

Sequence Entry

Enter your input data as a valid readseq bioformat:

Upload:    

OR
Enter your sequence below:

or

Additional Options

Alignment view	Pairwise Query-Anchored with Identities Query-Anchored without Identities Flat Query-Anchored with Identities Flat Query-Anchored with Identities Query-Anchored without Identities with Blunt Ends Flat Query-Anchored without Identities with Blunt Ends Tabular Output without Comments Tabular Output with Comments
Descriptions		Alignments
Expect	1e-13 1e-12 1e-11 1e-10 1e-9 1e-8 1e-7 1e-6 1e-5 1e-4 1e-2 1 1e1 1e2 1e3	Filter	default none
Matrix (protein only)	BLOSUM45 BLOSUM62 BLOSUM80 PAM30 PAM70
Query Genetic Codes (blastx only)	Standard Vertebrate Mitochondrial Yeast Mitochondrial Mold Mitochondrial Invertebrate Mitochondrial Ciliate Nuclear Echinoderm Mitochondrial Euplotid Nuclear Bacterial Alternative Yeast Nuclear Ascidian Mitochondrial Flatworm Mitochondrial Blepharisma Macronuclear
Perform ungapped alignment (N/A for tblastx)